末端限制性片段长度多态性技术分析硝化细菌微生物多样性

Analysis of microbial diversity of nitrifying bacteria by Terminal Restriction Fragment Length Polymorphism

摘要:

利用T_RFLP (末端限制性片段长度多态性) 技术，分析硝化细菌富集反应器中的微生物群落结构，并对硝化细菌的丰度进行半定量研究。结果表明，培养48 h后，硝化细菌富集效果最佳，多样性指数与初始培养相比下降了62.80％，富集出的硝化细菌主要为亚硝酸盐氧化菌 (Nitrobacter)。同时对投加该硝化细菌前后的对虾养殖水体进行微生物多样性的动态研究，并推测了虾塘水中可能稳定存在的几种主要细菌种类，其中投加富集硝化细菌前后均存在的细菌种类包括短芽孢杆菌Brevibacillus brevis、微杆菌Microbacterium lactium、固氮弧菌Azoarcus indigens或者霍氏鲍特菌Bordetella holmesii。

Abstract:

We analyzed the microbial diversity and quantity of nitrifying bacteria in the enrichment reactor by Terminal Restriction Fragment Length Polymorphism (T_RFLP), a cultured-independent molecular technique. The result indicated that nitrobacteria enriched the best, and the diversity index decreased 62.80% compared with the initial data. Nitrobacteria were predominant in the reactor. Meanwhile, we studied the microbial diversity before and after adding Nitrobacteria into shrimp ponds, and analyzed several major bacterial species that existed stably in the pond. According to the analysis by T_RFLP program, species including Brevibacillus brevis, Microbacterium lactium, Azoarcus indigens and Bordetella holmesii were the dominant bacteria in the ponds.