Application of metagenomics in the detection of microbial antibiotic resistance genes

doi:10.13344/j.microbiol.china.190009

Home > Archive>Volume 46, Issue 11, 2019 >3110-3123. DOI:10.13344/j.microbiol.china.190009

Application of metagenomics in the detection of microbial antibiotic resistance genes
DOI:
                        10.13344/j.microbiol.china.190009
                    
CSTR:
                        32113.14.j.MC.190009
                    
Author:
                        HU Hai-YanHU Hai-Yan
1 Laboratory of Quality & Safety Risk Assessment for Dairy Products of China Ministry of Agriculture and Rural Affairs, Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing 100193, China;2 College of Animal Science and Technology, Anhui Agricultural University, Hefei, Anhui 230000, China
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LIU Hui-MinLIU Hui-Min
1 Laboratory of Quality & Safety Risk Assessment for Dairy Products of China Ministry of Agriculture and Rural Affairs, Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing 100193, China;3 State Key Laboratory of Animal Nutrition, Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing 100193, China
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MENG LuMENG Lu
1 Laboratory of Quality & Safety Risk Assessment for Dairy Products of China Ministry of Agriculture and Rural Affairs, Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing 100193, China;3 State Key Laboratory of Animal Nutrition, Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing 100193, China
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DONG LeiDONG Lei
1 Laboratory of Quality & Safety Risk Assessment for Dairy Products of China Ministry of Agriculture and Rural Affairs, Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing 100193, China;3 State Key Laboratory of Animal Nutrition, Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing 100193, China
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LAN TuLAN Tu
1 Laboratory of Quality & Safety Risk Assessment for Dairy Products of China Ministry of Agriculture and Rural Affairs, Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing 100193, China;3 State Key Laboratory of Animal Nutrition, Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing 100193, China
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ZHENG NanZHENG Nan
1 Laboratory of Quality & Safety Risk Assessment for Dairy Products of China Ministry of Agriculture and Rural Affairs, Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing 100193, China;3 State Key Laboratory of Animal Nutrition, Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing 100193, China
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CHENG Jian-BoCHENG Jian-Bo
2 College of Animal Science and Technology, Anhui Agricultural University, Hefei, Anhui 230000, China
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WANG Jia-QiWANG Jia-Qi
1 Laboratory of Quality & safety Risk Assessment for Dairy Products of China Ministry of Agriculture and Rural Affairs, Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing 100193, China;3 State Key Laboratory of Animal Nutrition, Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing 100193, China
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Abstract:

Antibiotics are widely used in the treatment of human and animal diseases. Unreasonable use and abuse of antibiotics lead to the production and spread of resistant bacteria and resistance genes. Metagenomics can analyze the diversity of antibiotic resistance genes in different environments, and improve the existing or construct new metagenomic libraries, which will provide powerful references for future gene comparison. This article will review the application of metagenomics in the detection of microbial antibiotic resistance genes in humans, animals and the environment, and provide technical support for future assessment of resistance gene risks and addressing antibiotic resistance.

Key words:Metagenomics, Antibiotic resistance genes, Humans, Animals, Environment

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HU Hai-Yan, LIU Hui-Min, MENG Lu, DONG Lei, LAN Tu, ZHENG Nan, CHENG Jian-Bo, WANG Jia-Qi. Application of metagenomics in the detection of microbial antibiotic resistance genes[J]. Microbiology China, 2019, 46(11): 3110-3123

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Online: November 05,2019
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