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林麝源铜绿假单胞菌噬菌体vB_PaeM_PAMD02的生物学特性与全基因组序列分析
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四川省科技厅省级科研院所科技成果转化项目(2022JDZH0026)


Biological characterization, and whole genome sequencing of bacteriophage against Pseudomonas aeruginosa isolated from forest musk deer (Moschus berezovskii)
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    摘要:

    【背景】圈养林麝一半以上的死亡是由铜绿假单胞菌引起的化脓性疾病导致。另外,由于细菌的抗性增加,噬菌体是继抗生素后的另一抗菌选择。【目的】以分离自病死林麝肺脏的铜绿假单胞菌为宿主菌分离一株噬菌体,对其进行生物学特性、全基因组序列分析与体内抑菌试验。【方法】通过双层平板法分离纯化一株裂解性噬菌体,测定其裂解谱、最佳感染复数、一步生长曲线、热稳定性、最适生长pH等生物学特性,通过电镜观察其具体形态,进行全基因组测序与序列分析,并进行小鼠体内抑菌试验。【结果】分离到一株裂解性铜绿假单胞菌噬菌体并命名为vB_PaeM_PAMD02,该噬菌体具有透明且边缘清晰无晕环的噬菌斑,其裂解谱较窄,最佳感染复数为0.1,裂解潜伏期为40 min,裂解暴发量较高,热稳定性较高,可耐受弱碱环境。其全基因组大小为66 264 bp,GC含量为55.59%,序列注释结果显示该噬菌体具有92个开放阅读框,不含毒力与耐药基因,属于肌尾噬菌体科。小鼠体内抑菌试验结果显示了PAMD02对其宿主菌良好的抑菌效果。【结论】本研究分离的噬菌体PAMD02有较高的裂解效率,对不利环境有较好的耐受性,不含毒力基因与耐药基因,具有应用于临床治疗铜绿假单胞菌感染的潜力。

    Abstract:

    [Background] Pseudomonas aeruginosa (PA) is a common opportunistic pathogen. The septic diseases caused by PA account for more than 50% of the deaths in captive forest musk deer populations. Phages have become popular substitutes of antibiotics due to the increased resistance of bacteria. [Objective] To isolate a bacteriophage using PA isolated from the lungs of dead forest musk deer as the host bacteria, and to conduct biological characterization, whole genome sequencing, and in vivo bacteriostasis test on it. [Methods] Double-layer agar culture method was used to isolated a phage against PA from the daily drinking water of forest musk deer in Sichuan Institute of Musk Deer Breeding. The same method was used to determine the host range, optimal multiplicity of infection (MOI), one-step growth, thermostability, and pH range of this phage. Phage morphology was observed by transmission electron microscopy (TEM). The whole genome of the phage was sequenced and analyzed, and in vivo bacteriostasis test was carried out in mice. [Results] A phage strain against PA was isolated and named as vB_PaeM_PAMD02. It produced a transparent plaque with clear edge and no halo ring and had a narrow host range. The phage strain had high thermostability and was stable in weak basic environment, with the optimal MOI of 0.1 and the incubation period of 40 min. The whole genome sequencing showed that the genome of this phage had a length of 66 264 bp and the GC content of 55.59%. The annotation results showed that the phage had 92 open reading frames and carried no virulence gene or resistance gene. The results indicated that the phage belonged to the Myoviridae family. Animal experiments showed that the phage effectively inhibited the pathogenicity of bacteria in mice. [Conclusion] The isolated phage vB_PaeM_PAMD02 has high lysis efficiency and good tolerance to adverse environments. It has great potential to be applied in clinical prevention and treatment of PA infection.

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李依&#;,刘洁,焦升镜,伍茜,丁慧,付文龙,周磊,程建国,吴杰,罗燕. 林麝源铜绿假单胞菌噬菌体vB_PaeM_PAMD02的生物学特性与全基因组序列分析[J]. 微生物学通报, 2023, 50(7): 3020-3034

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  • 收稿日期:2022-10-08
  • 录用日期:2023-01-03
  • 在线发布日期: 2023-07-10
  • 出版日期: 2023-07-20
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