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牛巴氏杆菌病多重PCR检测技术的建立与应用
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中国兽医药品监察所-公益性专项(GY202103,GY202104);新疆生产建设兵团重大科技项目(2017AA003)


Establishment and application of multiplex PCR assay for bovine pasteurellosis
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    摘要:

    【背景】牛巴氏杆菌病是由血清型(A、B、E)多杀性巴氏杆菌(Pasteurella multocida,Pm)引起的一种严重危害养牛业的重要传染病,病原学聚合酶链反应(polymerase chain reaction,PCR)方法是诊断并防控该病的有效手段。【目的】建立检测血清型(A、B、E)多杀性巴氏杆菌的多重PCR方法,为临床诊断牛巴氏杆菌病和病原分型提供技术支撑。【方法】参考多杀性巴氏杆菌hyaD-hyaC基因、bcbD基因和ecbJ基因特异区域,设计3对特异性引物,以温度梯度PCR法确定适宜退火温度(Tm);采用棋盘试验优化引物浓度并初步建立多重PCR方法;采用重组质粒标准品及阳性菌株菌液确定其敏感性(最小检测量);以8种常见牛感染病原体[溶血性曼氏杆菌(Mannheimia hemolytica)C1655、大肠埃希氏菌(Escherichia coli)C237、产单核细胞李氏杆菌(Listeria monocytogenes)C1597、金黄色葡萄球菌(Staphylococcus aureus)C3053、都柏林沙门氏菌(Salmonella dublin)C79351、副结核分枝杆菌(Mycobacterium paratuberculosis)C1625、牛传染性鼻气管炎病毒(bovine infectious rhinotracheitis virus)CAV1546和牛支原体分离株(Mycoplasma bovis)C65-1]核酸样本确定其特异性;制备3批诊断试剂,对敏感性和特异性样品进行批间和批内试验,确定其重复性;运用建立的方法使用3种不同型号的PCR仪检测敏感性和特异性样品,确定其适用性;通过检测临床样本及人工模拟感染样本评价临床应用效果。【结果】在Tm为55℃时,3对引物浓度分别为0.25、0.30和0.20μmol/L条件下建立多重PCR方法较优,可以同时检测多杀性巴氏杆菌血清A型(821bp)、血清B型(203bp)和血清E型(363bp);该方法敏感性高,对重组质粒标准品pMD-A、pMD-B和pMD-E检测限分别为43.080、3.710和4.350copies/μL,对阳性菌液最低检出限均为102CFU细菌;其特异性强,仅对血清型(A、B、E)多杀性巴氏杆菌有特异性扩增条带,同时对其他病原体均无扩增条带;该方法重复性良好,批间与批内试验均一致;临床样本及人工模拟感染样本检测结果显示与病原分离鉴定符合率为100%。【结论】成功建立了一种可鉴定不同血清型的牛多杀性巴氏杆菌多重PCR检测方法。

    Abstract:

    [Background] Bovine pasteurellosis, caused by serotypes A, B, and E of Pasteurella multocida (Pm), is an acute infectious disease of cattle. Polymerase chain reaction (PCR) is an effective means to diagnose and control this disease. [Objective] To establish a multiplex PCR assay for rapid detection of serotypes A, B, and E of Pm and provide technical support for the rapid and accurate clinical diagnosis of bovine pasteurellosis. [Methods] According to the conserved regions of hyaD-hyaC, bcbD, and ecbJ genes of Pm, we designed three pairs of specific primers for PCR and determined the appropriate annealing temperature (Tm) by temperature-gradient PCR assay. Chessboard test was employed to optimize the primer concentration and then a multiplex PCR assay was established. The recombinant plasmid standard and positive strain were used to determine the sensitivity (limit of detection) of the established assay. The nucleic acid samples of 8 common bovine pathogens (Mannheimia hemolytica C1655, Escherichia coli C237, Listeria monocytogenes C1597, Staphylococcus aureus C3053, Salmonella dublin C79351, Mycobacterium paratuberculosis C1625, bovine infectious rhinotracheitis virus CAV1546, and Mycoplasma bovis C65-1) were used to determine the specificity of the multiplex PCR assay. Three batches of diagnostic reagents were prepared to perform inter-batch and intra-batch tests on sensitive and specific samples to determine the repeatability of the assay. Three different models of PCR instruments were used to detect sensitive and specific samples with the established method to determine the applicability of the assay. The performance of the assay in clinical application was evaluated by detection of clinical samples and simulated infection samples. [Results] The optimal multiplex PCR assay was established under the following conditions: Tm of 55 ℃ and the three pairs of primers at the concentrations of 0.25, 0.30, and 0.20 μmol/L, respectively. The established method could simultaneously detect Pm serotypes A (821 bp), B (203 bp), and E (363 bp). The multiplex PCR assay had high sensitivity. It showed the limits of detection of 43.080, 3.710, and 4.350 copies/μL for recombinant plasmid standards pMD-A, pMD-B, and pMD-E, respectively, as well as the limit of detection of 102 CFU for the positive bacterial liquid. Moreover, the established assay had strong specificity as it only produced bands for the serotypes A, B, and E of Pm and no bands for other pathogens. The consistent results of the inter-batch and intra-batch tests indicated good repeatability of the assay. The detection results of clinical samples and simulated infection samples showed a 100% coincidence rate with the pathogen isolation and identification. [Conclusion] The multiplex PCR assay for the detection of serotypes A, B, and E of Pm was successfully established, which provided technical support for the identification and epidemiological investigation of Pm.

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王豪杰,辛凌翔,任小侠,刘燕,姚文生,侯雪霞,李旭妮,朱良全. 牛巴氏杆菌病多重PCR检测技术的建立与应用[J]. 微生物学通报, 2022, 49(12): 5083-5091

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  • 收稿日期:2022-09-10
  • 最后修改日期:2022-09-30
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  • 在线发布日期: 2022-12-06
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