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不同牛分枝杆菌特异性基因PCR方法的比较
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国家重点研发计划(2017YFF0208603,2016YFD0500902)


Comparison on of different PCR methods for Mycobacterium bovis specific genes
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    摘要:

    【背景】牛结核病是我国二类动物疫病,世界动物卫生组织将其列为法定报告的动物疫病。牛主要通过患病牛呼吸道分泌物和咳嗽所产生的气溶胶感染;人则主要通过食用未经高温处理的病牛的肉或奶感染。因此,经过病原学PCR检测对疑似患病牛牛奶或屠宰组织样品进行快速检验确诊,能够最大限度地减少奶牛养殖中乳品生产业的经济损失。【目的】研究并确定适宜的牛分枝杆菌PCR扩增引物及参数,为临床快速准确诊断牛结核病提供参考。【方法】对已报道的5对PCR引物,运用降落(touch down) PCR法确定适宜退火温度(Tm);运用梯度稀释的牛分枝杆菌C68001株(国内牛结核菌素生产用菌株)基因组DNA以及不同菌液含量的人工模拟临床样本(淋巴结、肺脏和牛奶),确定不同引物PCR方法的敏感性;同时以6种常见牛感染菌(牛种布鲁氏菌2308、羊种布鲁氏菌Rev.1、牛分枝杆菌C68001和AN5、禽分枝杆菌C68202、副结核分枝杆菌C68681和胞内分枝杆菌C68226)核酸样本,确定不同引物PCR方法的特异性。【结果】所有引物在53?63 °C均含有目的条带,确定引物的最佳退火温度是60 °C。在细菌核酸敏感性检验中,1号和3号引物的检测敏感性最高,达10?10 ng/μL;其次是2号和5号,达10?5 ng/μL。对于人工模拟感染样本,1号、3号和4号引物在淋巴结和肺脏中检测敏感性最高,其次是2号;而2号、3号、4号和5号引物对奶样检测敏感性最高。对于特异性检验,2号和5号引物特异性较好,可检测到明显的牛分枝杆菌特异性条带,对通常不引起牛结核病而只干扰免疫学诊断的禽分枝杆菌检测条带较微弱,而布鲁氏菌、副结核分枝杆菌和胞内分枝杆菌均无检测条带。【结论】2号引物及其反应参数的PCR方法敏感性、特异性良好,适合用于牛结核病的快速准确诊断。

    Abstract:

    [Background] Bovine tuberculosis is a second-class animal disease in China, and it was listed as a legally reported animal disease by Word Organisation for Animal Health (OIE). Cattle are mainly infected by aerosols produced by respiratory secretions and coughs in Mycobacterium bovis-infected cattle; people are mainly infected with meat or milk from diseased cattle that have not been treated with high temperature. Therefore, the rapid detection of suspected diseased milk or slaughter tissue samples by pathogen PCR detection can minimize the economic loss of dairy farming industry, which is of great significance. [Objective] To study and determine the suitable PCR amplification primers and parameters of Mycobacterium bovis, providing reference for rapid and accurate diagnosis of Bovine tuberculosis. [Methods] For the five pairs of PCR primers reported, the appropriate annealing temperature (Tm) was determined by touch down PCR; to determine the sensitivity of PCR methods with different primers, we used the genomic DNA of the Mycobacterium bovis C68001 strain (the domestic strain for bovine tuberculin production) and the artificial liquid with different bacterial contents in simulate clinical samples (lymph nodes, lungs, and milk); and then 6 common bacteria infecting bovines (B. abortus 2308, B. melitensis Rev.1, M. bovis C68001 and AN5, M. avium C68202, M. paratuberculosis C68681 and M. intracellulare) were uesed to determine the specificity. [Results] All primers contained the target band at 53?63 °C, and the best suitable Tm was 60 °C. The primers No. 1 and No. 3 had the highest sensitivity detecting nucleic acid of C68001, reaching 10?10 ng/μL; followed by No. 2 and No.5, up to 10?5 ng/μL. For artificially simulated infection samples, primers No. 1, 3, and 4 were most sensitive to detection in lymph nodes and lungs, followed by No. 2; and primers No. 2, No. 3, No. 4, and No. 5 were the most sensitive to milk samples. For specificity tests, primers 2 and 5 have better specificity which can detect significant M. bovis specific bands. It is weak when detecting M. avium that do not normally cause bovine tuberculosis but interfere with immunological diagnosis, and it had no bands in brucella, M. bovis, M. paratuberculosis and M. intracellulare. [Conclusion] The PCR method with primer No. 2 had the best sensitivity and specificty, so it is suitable for rapid and accurate diagnosis of bovine tuberculosis.

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张春燕,秦玉明,边增杰,徐中清,牛凯,许冠龙,丁家波,鑫婷,朱良全. 不同牛分枝杆菌特异性基因PCR方法的比较[J]. 微生物学通报, 2020, 47(3): 782-791

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  • 在线发布日期: 2020-03-04
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