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微生物学通报

芽孢杆菌SK007的分类鉴定及其拮抗植物病原菌的功能分析
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国家重点研发计划(2018YFD0200403)


Classification and identification of Bacillus sp. SK007 with biocontrol activity
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    摘要:

    【背景】农业生产中,发掘和利用具有生防功能的微生物资源是保障粮食安全和提高作物产量的重要举措。【目的】明确土壤中芽孢杆菌SK007的分类地位,验证其对多种植物病原菌的拮抗作用,挖掘潜在的生防功能。【方法】通过16S rRNA基因和基因组分析方法确定分离菌株SK007的分类地位;采用平板对峙法研究该菌株对番茄灰霉病菌、白菜黑斑病菌、烟草赤星病菌、小麦赤霉病菌、马铃薯干腐病菌等植物病原菌的拮抗作用;采用AntiSMASH分析和预测菌株SK007的抗生素相关基因。【结果】基于16S rRNA基因、全基因组序列、平均核苷酸一致性和DNA同源性分析,结果表明菌株SK007属于Bacillus velezensis,并且具有产生脂肽类抗生素和聚酮类抗生素的基因,对多种植物病原真菌有较强的抗性。此外,菌株SK007基因组中抗生素基因簇数目较多,丰富度高。【结论】芽孢杆菌SK007在拮抗植物病原菌方面有许多优良性状,具有促进作物抗病和增产的潜力。

    Abstract:

    [Background] Discovery and utilization of microorganisms with biocontrol activity is important to keep crop health and yield in agricultural production. [Objective] Our study aimed to clarify the taxonomic status of Bacillus sp. SK007 isolated from soil, and to validate its antagonistic effect on multiple plant pathogens and, therefore uncover its potential biocontrol functions. [Methods] We first used 16S rRNA gene and whole-genome sequencing analysis to determine the taxonomic status of strain SK007. Plate isolate-antagonistic experiments were applied to explore the antagonistic effect of strain SK007 on Botrytis cinerea, Alternaria brassicicola, Alternaria alternata, Fusarium graminearum and Fusarium solani. AntiSMASH was used to predict antibiotic genes of strain SK007. [Results] Based on the analysis of 16S rRNA gene and whole-genome sequencing, average nucleotide identity and digital DNA-DNA hybridization, the results demonstrated that strain SK007 belonged to Bacillus velezensis, and possessed the genes in producing the lipopeptide antibiotics and polyketone antibiotics. In addition, SK007, with a large number and high abundance of antibiotic gene clusters in genome, exhibited strong resistance to a variety of plant pathogenic fungi. [Conclusion] Bacillus velezensis SK007 has excellent traits in plant disease resistance, and thus has potential roles in facilitating plant resistance to disease and promoting crop yield.

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靳泽星,秦娅,王洁丽,杜妮妮,李哲斐,陈卫民. 芽孢杆菌SK007的分类鉴定及其拮抗植物病原菌的功能分析[J]. 微生物学通报, 2019, 46(10): 2591-2600

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  • 在线发布日期: 2019-09-26
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