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偶氮染料脱色菌株AZR偶氮还原酶基因的克隆及其序列分析
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模集美大学中青年创新团队专项基金资助项目(No. 2006A002); 集美大学科研启动基金资助项目(No. C60610)


Cloning and Sequence Analysis of Azoreductase Gene from the Strain AZR
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    摘要:

    利用16S rRNA鉴定偶氮染料脱色菌株AZR属于葡萄球菌属(Staphylococcus)中的科氏葡萄球菌(Staphylococcus cohnii), 根据GeneBank上登录的葡萄球菌属的3个偶氮还原酶基因序列设计扩增引物, 从菌株AZR的基因组中扩增出偶氮还原酶基因, 其大小为567 bp, 编码188个氨基酸。GenBank搜索表明其为新基因, 递交GenBank数据库, 获得登录号为EU849488。通过互联网数据库及生物信息学分析工具进行初步分析表明, 该基因编码的蛋白属于黄素蛋白家族,

    Abstract:

    The result of 16S rRNA analysis showed the strain AZR belonged to Staphylococcus cohnii. According to three azoreductase’s gene sequences from Staphylococcus in GeneBank, a pair of primers were designed and the azoreductase’s gene was amplified from the strain AZR’s genome successfully. The sequence contained a complete 567 bp ORF (Open Reading Frame) encoding the azoreductase, consisting of 188 amino acids. Blast in GenBank indicated that it is a novel gene, and it has been deposited with the GenBank Data Libraries under accession number EU849488. The characteristics of the protein coded by this gene were ana-lyzed by bioinformatics. The result showed that this protein belonged to the flavin protein family and was a kind of NADPH-depedent FMN reductase, and it was stable, pI 5.75, located in cytoplasm, and composed of Alpha helix, extrended strand random coil. There was a srong transmembrance domain and contained some conserved sites such as protein dinase C-phosphorylation.

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杜翠红,高体琪,张稚兰,周集体. 偶氮染料脱色菌株AZR偶氮还原酶基因的克隆及其序列分析[J]. 微生物学通报, 2009, 36(10): 1501-1507

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