Abstract:Background The mellowing of strips is a key step in flue-cured tobacco production, converting agricultural maturity into industrial usability.Objective To compare the microbial community characteristics and basic biochemical indexes of strips at different spatial sites within the packaging box during mellowing.Methods Sampling was conducted at nine spatial sites of the packaging box of ‘K326’ strips mellowed for 20 months, followed by metagenomic sequencing and determination of functional enzyme activities, conventional chemical components, and neutral aroma components.Results Among the microbial communities in the nine samples, Pseudomonadota was the dominant phylum and Pseudomonas was the dominant genus. The upper-layer samples had the largest number of shared genes, which indicated small structural differences of microbial communities. The lower-layer samples had the largest number of unique genes, demonstrating higher microbial diversity and richness. The microbial community structure differed greatly between the middle-layer and lower-layer samples. The top three functions in terms of abundance were metabolism, amino acid transport and metabolism, and glycoside hydrolases and glycosyl transferases. The α-amylase activity was the highest in the sample from the center of the lower layer, and the β-galactosidase and superoxide dismutase activities were the highest in the sample from the center of the middle layer. The coordination of conventional chemical components was the best in the sample from the center of the lower layer, while the enrichment of neutral aroma components was the most significant in the sample from the middle layer. The spatial sites demonstrated weak correlations with the majority of basic biochemical indexes and strong correlations with 6-methyl-3,5-heptadien-2-one, 2-hexenal, and acetophenone.Conclusion There were significant differences in microbial community structure, functional gene abundance, and partial basic biochemical indexes among different spatial sites in the packaging box of strips during mellowing. The findings provide theoretical support for the precise regulation of the strip mellowing process.